This report documents the simulation of the Lockheed Martin designed Gravity Probe B (GPB) spacecraft developed tool by bd Systems Inc using the TREETOPS simulation. This study quantifies the effects of flexibility and liquid helium slosh on GPB spacecraft control performance. The TREETOPS simulation tool permits the simulation of flexible structures given that a flexible body model of the structure is available. For purposes of this study, a flexible model of the GPB spacecraft was obtained from Lockheed Martin. To model the liquid helium slosh effects, computational fluid dynamics (CFD) results' were obtained, and used to develop a dynamic model of the slosh effects. The flexible body and slosh effects were incorporated separately into the TREETOPS simulation, which places the vehicle in a 650 km circular polar orbit and subjects the spacecraft to realistic environmental disturbances and sensor error quantities. In all of the analysis conducted in this study the spacecraft is pointed at an inertially fixed guide star (GS) and is rotating at a constant rate about this line of sight. Francis, Ronnie and Wells, Eugene M. Marshall Space Flight Center...